Gene Variant Detail

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Gene KIT
Variant K550_V559del
Impact List deletion
Protein Effect gain of function - predicted
Gene Variant Descriptions KIT K550_V559del results in the deletion of ten amino acids in the juxtamembrane domain (exon 11) of the Kit protein from amino acids 550 to 559 (PMID: 16226710). K550_V559del has not been characterized, however similar Kit exon 11 deletions are activating (PMID: 9438854, PMID: 15365079), and therefore, is predicted to lead to a gain of Kit protein function.
Associated Drug Resistance
Category Variants Paths

KIT mutant KIT act mut KIT exon 11 del KIT K550_V559del

KIT mutant KIT exon11 KIT exon 11 del KIT K550_V559del

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Transcript NM_000222.3
gDNA chr4:g.54727416_54727445del30
cDNA c.1648_1677del30
Protein p.K550_V559delKPMYEVQWKV
Source Database RefSeq
Genome Build GRCh38/hg38
Transcript gDNA cDNA Protein Source Database Genome Build
NM_001385284.1 chr4:g.54727322_54727442del121 c.1648_1677del121 p.Q550_K559delQKPMYEVQWK RefSeq GRCh38/hg38
NM_001385286.1 chr4:g.54727428_54727457del30 c.1648_1677del30 p.E550_I559delEVQWKVVEEI RefSeq GRCh38/hg38
NM_000222.2 chr4:g.54727416_54727445del30 c.1648_1677del30 p.K550_V559del RefSeq GRCh38/hg38
NM_000222.3 chr4:g.54727416_54727445del30 c.1648_1677del30 p.K550_V559delKPMYEVQWKV RefSeq GRCh38/hg38
NM_001385285.1 chr4:g.54727416_54727445del30 c.1648_1677del30 p.K550_V559delKPMYEVQWKV RefSeq GRCh38/hg38
NM_001093772.2 chr4:g.54727428_54727457del30 c.1648_1677del30 p.E550_I559delEVQWKVVEEI RefSeq GRCh38/hg38
XM_017008178.1 chr4:g.54727416_54727445del30 c.1648_1677del30 p.K550_V559del RefSeq GRCh38/hg38
NM_001385292.1 chr4:g.54727425_54727454del30 c.1648_1677del30 p.Y550_E559delYEVQWKVVEE RefSeq GRCh38/hg38
NM_000222 chr4:g.54727416_54727445del30 c.1648_1677del30 p.K550_V559del RefSeq GRCh38/hg38
NM_001385290.1 chr4:g.54727322_54727442del121 c.1648_1677del121 p.Q550_K559delQKPMYEVQWK RefSeq GRCh38/hg38
XM_017008178 chr4:g.54727416_54727445del30 c.1648_1677del30 p.K550_V559del RefSeq GRCh38/hg38
NM_001385288.1 chr4:g.54727425_54727454del30 c.1648_1677del30 p.Y550_E559delYEVQWKVVEE RefSeq GRCh38/hg38

Filtering

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  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

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  • Click on any column header arrows to sort by that column
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Molecular Profile Protein Effect Treatment Approaches
KIT K550_V559del gain of function - predicted KIT Inhibitor