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Gene MSH6
Variant Y397fs
Impact List frameshift
Protein Effect loss of function - predicted
Gene Variant Descriptions MSH6 Y397fs results in a change in the amino acid sequence of the Msh6 protein beginning at aa 397 of 1360, likely resulting in premature truncation of the functional protein (UniProt.org). Y397fs (reported as Y397fs*3) has not been biochemically characterized, but is associated with a loss of Msh6 protein expression and increased microsatellite instability in tumor samples (PMID: 14974087), and therefore, is predicted to lead to a loss of Msh6 protein function.
Associated Drug Resistance
Category Variants Paths

MSH6 mutant MSH6 inact mut MSH6 Y397fs

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Transcript NM_000179.3
gDNA chr2:g.(47799171_47799172)
cDNA c.(1189_1188)
Protein p.Y397fs
Source Database RefSeq
Genome Build GRCh38/hg38
Transcript gDNA cDNA Protein Source Database Genome Build
NM_001406796.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
XM_024452819.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_001406808.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_001406800.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_001406817.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_000179 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_000179.3 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_001406803.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_001406809.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_001406798.1 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38
NM_000179.2 chr2:g.(47799171_47799172) c.(1189_1188) p.Y397fs RefSeq GRCh38/hg38

Filtering

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Sorting

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Molecular Profile Protein Effect Treatment Approaches
MSH6 Y397fs loss of function - predicted