Gene Variant Detail

Contact

Missing content? – Request curation!

Request curation for specific Genes, Variants, or PubMed publications.

Have questions, comments, or suggestions? - Let us know!

Email us at : ckbsupport@genomenon.com

Gene MSH6
Variant T1225M
Impact List missense
Protein Effect unknown
Gene Variant Descriptions MSH6 T1225M lies within the ATPase domain of the Msh6 protein (PMID: 17531815). T1225M demonstrates proficient mismatch repair activity compared to wild-type protein in in vitro assays (PMID: 22102614, PMID: 31965077), but has not been fully biochemically characterized and therefore, its effect on Msh6 protein function is unknown.
Associated Drug Resistance
Category Variants Paths

MSH6 mutant MSH6 T1225M

Filtering

  • Case insensitive filtering will display rows if any text in any cell matches the filter term
  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

  • Generally, the default sort order for tables is set to be first column ascending; however, specific tables may set a different default sort order.
  • Click on any column header arrows to sort by that column
  • Hold down the Shift key and click multiple columns to sort by more than one column. Be sure to set ascending or descending order for a given column before moving on to the next column.

Transcript NM_000179.3
gDNA chr2:g.47806231C>T
cDNA c.3674C>T
Protein p.T1225M
Source Database RefSeq
Genome Build GRCh38/hg38
Transcript gDNA cDNA Protein Source Database Genome Build
XM_024452819.1 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_000179 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_001406809.1 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_001406800.1 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_001281492 chr2:g.47806841_47806842delCTinsTG c.3674_3675delCTinsTG p.T1225M RefSeq GRCh38/hg38
NM_001281492.1 chr2:g.47806841_47806842delCTinsTG c.3674_3675delCTinsTG p.T1225M RefSeq GRCh38/hg38
NM_001406796.1 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_000179.2 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_001406808.1 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38
NM_001281492.2 chr2:g.47806841_47806842delCTinsTG c.3674_3675delCTinsTG p.T1225M RefSeq GRCh38/hg38
NM_000179.3 chr2:g.47806231C>T c.3674C>T p.T1225M RefSeq GRCh38/hg38

Filtering

  • Case insensitive filtering will display rows if any text in any cell matches the filter term
  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

  • Generally, the default sort order for tables is set to be first column ascending; however, specific tables may set a different default sort order.
  • Click on any column header arrows to sort by that column
  • Hold down the Shift key and click multiple columns to sort by more than one column. Be sure to set ascending or descending order for a given column before moving on to the next column.

Molecular Profile Protein Effect Treatment Approaches
MSH6 T1225M unknown