Gene Variant Detail

Contact

Missing content? – Request curation!

Request curation for specific Genes, Variants, or PubMed publications.

Have questions, comments, or suggestions? - Let us know!

Email us at : ckbsupport@genomenon.com

Gene MSH6
Variant T521K
Impact List missense
Protein Effect loss of function - predicted
Gene Variant Descriptions MSH6 T521K lies within the connector domain of the Msh6 protein (PMID: 17531815). T521K (corresponds to T520K in mouse) results in impaired mismatch binding and deficient mismatch repair activity in in vitro assays (PMID: 31965077), and therefore, is predicted to lead to a loss of Msh6 protein function.
Associated Drug Resistance
Category Variants Paths

MSH6 mutant MSH6 inact mut MSH6 T521K

Filtering

  • Case insensitive filtering will display rows if any text in any cell matches the filter term
  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

  • Generally, the default sort order for tables is set to be first column ascending; however, specific tables may set a different default sort order.
  • Click on any column header arrows to sort by that column
  • Hold down the Shift key and click multiple columns to sort by more than one column. Be sure to set ascending or descending order for a given column before moving on to the next column.

Transcript NM_000179.3
gDNA chr2:g.47799545C>A
cDNA c.1562C>A
Protein p.T521K
Source Database RefSeq
Genome Build GRCh38/hg38
Transcript gDNA cDNA Protein Source Database Genome Build
NM_000179.3 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406817.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406808.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_000179.2 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
XM_024452819.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406809.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406800.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_000179 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406803.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406796.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38
NM_001406798.1 chr2:g.47799545C>A c.1562C>A p.T521K RefSeq GRCh38/hg38

Filtering

  • Case insensitive filtering will display rows if any text in any cell matches the filter term
  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

  • Generally, the default sort order for tables is set to be first column ascending; however, specific tables may set a different default sort order.
  • Click on any column header arrows to sort by that column
  • Hold down the Shift key and click multiple columns to sort by more than one column. Be sure to set ascending or descending order for a given column before moving on to the next column.

Molecular Profile Protein Effect Treatment Approaches
MSH6 T521K loss of function - predicted