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| Gene | KIT |
| Variant | V559_V560del |
| Impact List | deletion |
| Protein Effect | gain of function |
| Gene Variant Descriptions | KIT V559_V560del results in the deletion of two amino acids in the juxtamembrane domain (exon 11) of the Kit protein from amino acids 559 to 560 (UniProt.org). V559_V560del confers a gain of function on Kit, as indicated by constitutive phosphorylation of Kit, is transforming in cell culture, and promotes tumor formation in mice (PMID: 9797363). |
| Associated Drug Resistance | |
| Category Variants Paths |
KIT mutant KIT act mut KIT exon 11 del KIT V559_V560del KIT mutant KIT exon11 KIT exon 11 del KIT V559_V560del |
| Transcript | NM_000222.3 |
| gDNA | chr4:g.54727444_54727449delTTGTTG |
| cDNA | c.1676_1681delTTGTTG |
| Protein | p.V559_V560delVV |
| Source Database | RefSeq |
| Genome Build | GRCh38/hg38 |
| Transcript | gDNA | cDNA | Protein | Source Database | Genome Build |
|---|---|---|---|---|---|
| NM_001385290.1 | chr4:g.54727440_54727445delAAGGTT | c.1675_1680delAAGGTT | p.K559_V560delKV | RefSeq | GRCh38/hg38 |
| XM_017008178 | chr4:g.54727444_54727449delTTGTTG | c.1676_1681delTTGTTG | p.V559_V560del | RefSeq | GRCh38/hg38 |
| NM_001385284.1 | chr4:g.54727440_54727445delAAGGTT | c.1675_1680delAAGGTT | p.K559_V560delKV | RefSeq | GRCh38/hg38 |
| NM_000222.3 | chr4:g.54727444_54727449delTTGTTG | c.1676_1681delTTGTTG | p.V559_V560delVV | RefSeq | GRCh38/hg38 |
| NM_001385285.1 | chr4:g.54727444_54727449delTTGTTG | c.1676_1681delTTGTTG | p.V559_V560delVV | RefSeq | GRCh38/hg38 |
| XM_017008178.1 | chr4:g.54727444_54727449delTTGTTG | c.1676_1681delTTGTTG | p.V559_V560del | RefSeq | GRCh38/hg38 |
| NM_000222 | chr4:g.54727444_54727449delTTGTTG | c.1676_1681delTTGTTG | p.V559_V560del | RefSeq | GRCh38/hg38 |
| NM_001385292.1 | chr4:g.54727452_54727457delGAGATA | c.1675_1680delGAGATA | p.E559_I560delEI | RefSeq | GRCh38/hg38 |
| NM_001093772.2 | chr4:g.54727455_54727460delATAAAT | c.1675_1680delATAAAT | p.I559_N560delIN | RefSeq | GRCh38/hg38 |
| NM_000222.2 | chr4:g.54727444_54727449delTTGTTG | c.1676_1681delTTGTTG | p.V559_V560del | RefSeq | GRCh38/hg38 |
| NM_001385286.1 | chr4:g.54727455_54727460delATAAAT | c.1675_1680delATAAAT | p.I559_N560delIN | RefSeq | GRCh38/hg38 |
| NM_001385288.1 | chr4:g.54727452_54727457delGAGATA | c.1675_1680delGAGATA | p.E559_I560delEI | RefSeq | GRCh38/hg38 |
| Molecular Profile | Protein Effect | Treatment Approaches |
|---|---|---|
| KIT V559_V560del | gain of function | KIT Inhibitor |