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Gene | TSC2 |
Variant | R57H |
Impact List | missense |
Protein Effect | unknown |
Gene Variant Descriptions | TSC2 R57H lies within the TSC1-interacting region of the Tsc2 protein (UniProt.org). R57H results in reduced expression of Tsc1 and Tsc2, however, also demonstrates increased S6k phosphorylation compared to wild-type Tsc2 in cultured cells (PMID: 21309039), and therefore, its effect on Tsc2 protein function is unknown. |
Associated Drug Resistance | |
Category Variants Paths |
TSC2 mutant TSC2 R57H |
Transcript | NM_000548.5 |
gDNA | chr16:g.2050431G>A |
cDNA | c.170G>A |
Protein | p.R57H |
Source Database | RefSeq |
Genome Build | GRCh38/hg38 |
Transcript | gDNA | cDNA | Protein | Source Database | Genome Build |
---|---|---|---|---|---|
XM_024450413.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406690.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406671.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406667.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406663.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406664.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522638 | chr16:g.2047991_2047992delGGinsAT | c.170_171delGGinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522639 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_000548.4 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001318827.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001370404.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406668.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522640 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023615.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406673.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_005255529.4 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001318827.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001318832 | chr16:g.2048751_2048753delAGAinsCAT | c.169_171delAGAinsCAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001077183.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001318827 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406693.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406691.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522639.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522638.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023618 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001077183 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406692.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522638.2 | chr16:g.2047991_2047992delGGinsAT | c.170_171delGGinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522637.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001114382.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522636.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001114382.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_000548.5 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_005255529 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406670.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_005255531.4 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_000548 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522637 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406694.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_005255531 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001077183.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023617 | chr16:g.2047991_2047992delGGinsAT | c.170_171delGGinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023617.1 | chr16:g.2047991_2047992delGGinsAT | c.170_171delGGinsAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406689.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023615 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023618.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522637.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406678.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522639.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406665.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001318832.2 | chr16:g.2048751_2048753delAGAinsCAT | c.169_171delAGAinsCAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001363528.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_021055.3 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001370405.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406697.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001318832.1 | chr16:g.2048751_2048753delAGAinsCAT | c.169_171delAGAinsCAT | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406695.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522636.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023616.1 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522640.2 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001114382 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
XM_011522636 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
NM_001406696.1 | chr16:g.2064342_2064343delGAinsAT | c.170_171delGAinsAT | p.R57H | RefSeq | GRCh38/hg38 |
XM_017023616 | chr16:g.2050431G>A | c.170G>A | p.R57H | RefSeq | GRCh38/hg38 |
Molecular Profile | Indication/Tumor Type | Response Type | Therapy Name | Approval Status | Evidence Type | Efficacy Evidence | References |
---|---|---|---|---|---|---|---|
TSC2 mutant | lung non-small cell carcinoma | no benefit | Vistusertib | Case Reports/Case Series | Actionable | In a Phase II trial (NLMT), Vistusertib (AZD2014) treatment did not result in a confirmed response (0/5) or durable clinical benefit (0/5) in patients with non-small cell lung cancer harboring TSC1 or TSC2 mutations, thus the cohort was closed due to futility (PMID: 32669708, NCT02664935). | 32669708 |
TSC2 mutant | renal cell carcinoma | conflicting | Everolimus | Clinical Study - Cohort | Actionable | In a retrospective analysis, TSC1, TSC2, or MTOR mutation status was not associated with progression-free survival in renal cell carcinoma patients treated with Afinitor (everolimus) (PMID: 30327302). | 30327302 |
TSC2 mutant | renal cell carcinoma | conflicting | Everolimus | Case Reports/Case Series | Actionable | In a clinical study, treatment with Afinitor (everolimus) or Torisel (temsirolimus) resulted in more partial responses (odds ratio = 0.08, p=0.030) in patients with renal cell carcinoma harboring mTOR pathway mutations, including MTOR (n=8), TSC1 (n=1), and TSC2 (n=2), than those without mutations (n=76) (PMID: 31335987). | 31335987 |
TSC2 mutant | renal cell carcinoma | predicted - sensitive | Temsirolimus | Case Reports/Case Series | Actionable | In a clinical study, treatment with Afinitor (everolimus) or Torisel (temsirolimus) resulted in more partial responses (odds ratio = 0.08, p=0.030) in patients with renal cell carcinoma harboring mTOR pathway mutations, including MTOR (n=8), TSC1 (n=1), and TSC2 (n=2), than those without mutations (n=76) (PMID: 31335987). | 31335987 |
TSC2 mutant | osteosarcoma | no benefit | Irinotecan + Temozolomide + Temsirolimus | Case Reports/Case Series | Actionable | In a clinical case study, Torisel (temsirolimus), Temodar (temozolomide), and Camptosar (irinotecan) combination treatment resulted in progressive disease in a pediatric patient with osteosarcoma harboring a TSC2 mutation (PMID: 37523146; NCT03336931). | 37523146 |
TSC2 mutant | subependymal giant cell astrocytoma | predicted - sensitive | Everolimus | Phase III | Actionable | In a Phase III trial (EXIST-1), Afinitor (everolimus) treatment resulted in a 50% or more tumor reduction in 35% (27/78) of adult and pediatric patients diagnosed with tuberous sclerosis complex and had subependymal giant cell astrocytoma, compared to 0% (0/39) in the placebo group, 85% (99/117) of the patients harbored mutations in TSC1 and/or TSC2 (PMID: 23158522; NCT00789828). | 23158522 |
TSC2 mutant | osteosarcoma | no benefit | Temsirolimus | Preclinical - Pdx | Actionable | In a preclinical study, Torisel (temsirolimus) treatment did not improve event-free survival in an osteosarcoma patient-derived xenograft (PDX) model harboring a TSC2 mutation (PMID: 37523146). | 37523146 |
TSC2 mutant | hepatocellular carcinoma | decreased response | Sorafenib | Clinical Study - Cohort | Actionable | In a clinical case study, Nexavar (sorafenib) treatment of patients with hepatocellular carcinoma harboring Mtor pathway mutations in PIK3CA, PTEN, TSC2, or TSC1 (n=12), resulted in a lower disease control rate (8.3% vs. 40.2%), shorter progression-free survival (1.9 months vs. 5.3 months) and shorter overall survival (10.4 months vs. 17.9 months) compared to patients without mutations in this pathway (n=67) (PMID: 30373752; NCT01775072). | 30373752 |